Cheesy Pesto Zucchini Boats

Featured in: Everyday Home Meals

This dish features tender zucchini halves scooped and filled with vibrant basil pesto combined with fresh cherry tomatoes, red onion, and garlic. A blend of creamy cheeses including mozzarella, ricotta, and Parmesan tops the boats, which are baked until bubbly and golden. Nutty pine nuts or walnuts add texture, while optional quinoa or rice boost heartiness. Perfect as a main or side, this Mediterranean-inspired dish balances fresh vegetables and rich flavors in an easy 45-minute preparation.

Updated on Tue, 23 Dec 2025 10:41:00 GMT
Golden, bubbly melted cheese topping savory Cheesy Pesto Zucchini Boats filled with fresh, vibrant vegetables. Save to Pinterest
Golden, bubbly melted cheese topping savory Cheesy Pesto Zucchini Boats filled with fresh, vibrant vegetables. | tongsanchor.com

My neighbor brought over a bundle of zucchini from her garden one August evening, and I had that familiar panic of having too much of one vegetable and not enough ideas. I'd made stuffed peppers before, but something about halving those tender green boats and imagining them filled with pesto and melted cheese felt like discovering a shortcut I'd somehow missed. The first time I pulled them from the oven, the kitchen smelled like basil and toasted pine nuts, and I knew this would become a regular rotation in my kitchen.

Last summer I made these for a small dinner party where one guest mentioned she'd gone vegetarian just that month, still figuring out what to cook. When she came back for seconds and asked for the recipe, I realized these boats had done something quiet but powerful—they'd shown her that eating plants didn't mean sacrificing comfort or satisfaction. That moment stuck with me more than any compliment about the food itself.

Ingredients

  • Zucchini, 4 medium: Choose ones that are firm and roughly the same size so they cook evenly; avoid any with soft spots.
  • Cherry tomatoes, 1 cup halved: Their sweetness balances the earthiness of the zucchini and pesto.
  • Red onion, 1/2 small finely chopped: The bite mellows as it cooks, adding depth without overpowering.
  • Garlic, 1 clove minced: Use fresh if you can; it transforms the filling into something with real character.
  • Basil pesto, 1/3 cup: Homemade tastes noticeably different, but store-bought works beautifully when life is busy.
  • Cooked quinoa or rice, 1/2 cup optional: Adds substance and makes the dish feel more like a complete meal.
  • Parmesan cheese, 1/4 cup grated: Use a microplane grater if you have one; freshly grated melts more evenly than pre-shredded.
  • Mozzarella cheese, 1/2 cup shredded: The stretchy, gooey element that makes everything worth it.
  • Ricotta or cottage cheese, 1/2 cup: Creates a creamy, lighter texture than using all mozzarella.
  • Pine nuts or walnuts, 2 tbsp optional: They toast slightly in the oven and add a nutty crunch that feels like a small luxury.
  • Salt, pepper, and olive oil to taste: Season boldly; zucchini can taste bland if you hold back.

Instructions

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Get your oven ready:
Preheat to 400°F and line your baking dish with parchment paper or give it a light coating of oil so nothing sticks. This small step saves frustration later.
Hollow out the zucchini:
Slice each zucchini in half lengthwise, then use a sturdy spoon to scoop out the center carefully, leaving about a quarter-inch shell so the boats hold their shape. Chop the scooped flesh finely and set it aside—this goes into the filling.
Prepare the boats:
Place your zucchini halves cut-side up in the baking dish and brush them lightly with olive oil, then season with salt and pepper. This small seasoning step prevents them from tasting hollow and plain.
Make the filling:
Combine the chopped zucchini flesh, cherry tomatoes, red onion, garlic, pesto, cooked grains if using, ricotta, and half the Parmesan in a bowl. Mix until everything is evenly distributed, then taste and adjust salt and pepper—pesto is salty, so go easy at first.
Fill and top:
Spoon the mixture generously into each zucchini boat, then top with shredded mozzarella and a sprinkle of the remaining Parmesan. Add your nuts now if you're using them; they'll toast slightly in the oven.
Bake until golden:
Slide the dish into the oven for 20 to 25 minutes until the zucchini is tender when pierced with a knife and the cheese is bubbly and starting to brown at the edges. That golden color is when it tastes best.
Rest and serve:
Let the boats cool for a few minutes so the cheese sets slightly and they're easier to handle. A small handful of fresh basil on top just before serving adds brightness and a reminder of where the pesto came from.
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| tongsanchor.com

I once made these for myself on a quiet Tuesday night when I needed something that felt nourishing without being complicated. Watching the cheese bubble and turn golden while I set a simple table for one, I realized this dish had shifted from being something I made when I had vegetables to use up into something I actually craved. That's when you know a recipe has become truly yours.

Flavor Balance and Variations

The beauty of this dish lies in how the bright, sharp pesto cuts through the creamy cheese and soft zucchini. If your pesto is particularly intense, you can tone it down by mixing it with a bit of the ricotta before adding it to the filling. For a different direction entirely, try a sun-dried tomato paste instead, or go lighter with a basil oil and lemon zest if you want something fresher and less rich.

Make It Your Own

This is one of those recipes that invites tinkering. Some people swear by adding spinach or finely chopped kale to the filling for earthiness, while others layer in roasted red peppers or olives for a briny note. I once experimented with caramelized onions instead of raw, which made the whole dish taste deeper and more like something you'd sit with slowly.

Serving and Pairing Ideas

These boats are substantial enough to stand alone as a light main course, but they shine alongside a crisp green salad and crusty bread for soaking up any savory juices. The pesto and cheese pair beautifully with a chilled Sauvignon Blanc if you're in the mood to drink, or simply with cold water and good company.

  • A squeeze of fresh lemon juice just before eating brightens everything and cuts through the richness of the cheese.
  • Leftover boats reheat gently in a 350°F oven and taste even better the next day as the flavors settle together.
  • You can assemble these boats in advance and refrigerate them until you're ready to bake, which means less stress on company night.
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A close-up of baked Cheesy Pesto Zucchini Boats showcasing melted mozzarella and a hint of fresh basil. Save to Pinterest
A close-up of baked Cheesy Pesto Zucchini Boats showcasing melted mozzarella and a hint of fresh basil. | tongsanchor.com

This is the kind of recipe that keeps giving—it works for weeknight dinners, impromptu gatherings, and those moments when you want to eat something that tastes like care without spending all evening in the kitchen. Make it once and you'll find yourself reaching for it again.

Recipe Questions & Answers

What type of cheese works best for the filling?

A combination of Parmesan, mozzarella, and ricotta provides a creamy, melty texture and rich flavor. Plant-based cheeses can be used for a vegan alternative.

Can I prepare the zucchini boats ahead of time?

Yes, you can assemble the zucchini boats and refrigerate them for a few hours before baking. Bake just before serving for best results.

What can I use as a nut substitute in the filling?

If nuts aren't preferred, simply omit pine nuts or walnuts. You can also add seeds like sunflower or pumpkin for extra crunch.

Is quinoa necessary in the filling?

Quinoa or rice is optional for added heartiness, but the dish is flavorful and satisfying without them, focusing on vegetables and cheese.

How can I make this dish gluten-free?

Use gluten-free basil pesto and ensure any added grains like quinoa are gluten-free to keep the dish safe for gluten-sensitive diets.

What are good side dishes to serve with these zucchini boats?

A crisp green salad and crusty bread complement the vibrant flavors well, or pair with light Italian wines like Sauvignon Blanc or a mild red.

Cheesy Pesto Zucchini Boats

Zucchini halves filled with basil pesto, veggies, and gooey cheese for a flavorful vegetarian dish.

Prep Time
20 min
Cook Time
25 min
Combined Time
45 min
Recipe by Wyatt Allen


Skill Level Easy

Cuisine Mediterranean

Makes 4 Serves

Diet Preferences Meat-Free, Gluten-Free

What You Need

Vegetables

01 4 medium zucchini
02 1 cup cherry tomatoes, halved
03 1/2 small red onion, finely chopped
04 1 clove garlic, minced

Pesto & Filling

01 1/3 cup basil pesto (store-bought or homemade)
02 1/2 cup cooked quinoa or rice (optional)
03 1/4 cup grated Parmesan cheese
04 1/2 cup shredded mozzarella cheese
05 1/2 cup ricotta or cottage cheese
06 2 tablespoons pine nuts or chopped walnuts (optional)
07 Salt, to taste
08 Black pepper, to taste
09 Olive oil, for drizzling

How To Make It

Step 01

Preheat Oven: Set the oven to 400°F and prepare a baking dish by lining it with parchment paper or lightly greasing it.

Step 02

Prepare Zucchini: Cut zucchini lengthwise and scoop out the centers, leaving about a 1/4-inch thick shell. Finely chop the reserved flesh.

Step 03

Season Zucchini Boats: Arrange zucchini halves cut side up in the baking dish, brush with olive oil, and season with salt and pepper.

Step 04

Mix Filling: Combine chopped zucchini flesh, cherry tomatoes, red onion, garlic, basil pesto, cooked quinoa or rice (if using), ricotta or cottage cheese, and half the Parmesan. Season with salt and pepper; mix thoroughly.

Step 05

Stuff Zucchini: Fill each zucchini half evenly with the mixture, then top with shredded mozzarella and sprinkle with remaining Parmesan and optional nuts.

Step 06

Bake: Bake for 20 to 25 minutes until zucchini is tender and cheese is golden and bubbling.

Step 07

Cool and Serve: Allow to cool briefly before serving; garnish with fresh basil if desired.

Equipment Needed

  • Chef's knife
  • Spoon
  • Mixing bowl
  • Baking dish
  • Oven

Allergy Info

Always check each component for allergens and reach out to a healthcare provider if you’re uncertain.
  • Contains dairy and may contain tree nuts; verify labels for pesto and cheese for gluten-free status.

Nutrition Details (per serving)

These nutritional numbers are only for guidance and don't replace professional medical advice.
  • Calorie Count: 255
  • Fat content: 15 g
  • Carbohydrates: 16 g
  • Proteins: 13 g